The GPU Programming for Molecular Modeling workshop will extend GPU programming techniques to the field of molecular modeling, including subjects such as particle-grid algorithms (electrostatics, molecular surfaces, density maps, and molecular orbitals), particle-particle algorithms with an emphasis on non-bonded force calculations, radial distribution functions in GPU histogramming, single-node multi-GPU algorithms, and GPU clusters. Specific examples utilizing the NAMD and VMD software programs will be introduced and discussed in detail. The workshop is designed for researchers in computational and/or biophysical fields who seek to extend their GPU programming skills to include molecular modeling. Advanced lecture sessions will be followed by extended discussion periods between lecturers and participants and laboratory time in which students will be able to work on their own molecular modeling GPU codes. See workshop website for details and application: http://www.ks.uiuc.edu/Training/Workshop/GPU_Jul2014/
This webinar covers how Geoweb3d uses the GPU for real-time geospatial 3D visualization, modeling, and analytics. Geoweb3D will demonstrate how native, high resolution datasets including GIS, CAD, 3D Models, LIDAR, and FMV are fused together in real-time with game quality graphics and pixel accurate analysis. The 3D engine uses a GPU resident mesh that adapts to any resolution data on the fly eliminating the need to preprocess any data prior to real-time use. Demonstration will include Geoweb3d Mobile which now uses HTML5 for use on any device in the cloud including phones and tablets.
To register follow this link: https://www2.gotomeeting.com/register/226039466
CfP: Workshop on Heterogeneous and Unconventional Cluster Architectures and Applications (HUCAA2014)March 28th, 2014
The workshop on Heterogeneous and Unconventional Cluster Architectures and Applications, held in conjunction with ICPP 2014, September 9-12, 2014, Minneapolis, MN, USA, gears to gather recent work on heterogeneous and unconventional cluster architectures and applications, which might have a big impact on future cluster architectures. This includes any cluster architecture that is not based on the usual commodity components and therefore makes use of some special hard- or software elements, or that is used for very special and unconventional applications. In particular we call for GPUs and other accelerators (Intel MIC/Xeon Phi, FPGA) used at cluster level. Other examples include virtualization, in-memory storage, hard- and software interactions, run-times, databases, and device-to-device communication. We are in particular encouraging work on disruptive approaches, which may show inferior performance today but can already point out their performance potential. The broad scope of the workshop facilitates submissions on unconventional uses of hardware or software, gearing to gather ideas that are coming to life now and not limiting them except for their context: clusters. Also, these proposals may rather be reflective of a broader industry trend.
We are seeking new proposals presented from a holistic perspective. In this regard, one of the aims of the workshop is anticipating the evolution of clusters. Instead of just presenting new work carried out in the traditional cluster areas usually addressed in other conferences and workshops, we are thinking on creating the right atmosphere for a discussion of opportunities in cluster computing. In this regard, contributions would not only be accepted according to their technical merits but also according to their contribution to this discussion.
More information: http://www.hucaa-workshop.org/hucaa2014
The 7th UCHPC workshop will beheld in conjunction with Euro-Par 2014, August 25 – August 29, in Porto, Portugal.
Recent issues with the power consumption of conventional HPC hardware results in both new interest in accelerator hardware and in usage of mass-market hardware originally not designed for HPC. The most prominent examples are GPUs, but FPGAs, DSPs and embedded designs are also possible candidates to provide higher power efficiency, as they are used in energy-restriced environments, such as smartphones or tablets. The so-called “dark silicon” forecast, i.e. not all transistors may be active at the same time, may lead to even more specialized hardware in future mass-market products. Exploiting this hardware for HPC can be a worthwhile challenge.
Agent-Based Simulation Models are an increasingly popular tool for research and management in many fields such as ecology, economics and sociology. In some fields, such as social sciences, these models are seen as a key instrument to the generative approach, essential for understanding complex social phenomena. But also in policy-making, biology, military simulations, control of mobile robots and economics, the relevance and effectiveness of Agent-Based Simulation Models is recently recognized.
Several frameworks have been recently developed and are active in this field. They range from GPU-manycore approaches to parallel and/or distributed simulation environments.
The key objective of this workshop is to bring together researchers that are interested in getting more performances from their simulations by using synchronized, many-core simulations (e.g., GPUs), strongly coupled, parallel simulations (e.g. MPI) and loosely coupled, distributed simulations (distributed heterogeneous setting). More information: http://www.padabs.org/
On March 5 at 11:00am (PST), Acceleware hosts a webinar on accelerating a seismic algorithm on a cluster of AMD GPU compute nodes. The presentation will begin with an outline of the full waveform inversion (FWI) algorithm, followed by an introduction to OpenCL. The OpenCL programming model and memory spaces will be introduced. Strategies for formulating the problem to take advantage of the massively parallel GPU architecture, and key optimizations techniques are discussed including coalescing and an iterative approach to handle the slices. Performance results for the GPU are compared to the CPU run times. Click here to register.
High-Performance Graphics is the leading international forum for performance-oriented graphics and imaging systems research including innovative algorithms, efficient implementations, languages, parallelism, compilers, parallelism, hardware and architectures for high-performance graphics. High-Performance Graphics was founded in 2009, synthesizing multiple conferences to bring together researchers, engineers, and architects to discuss the complex interactions of parallel hardware, novel programming models, and efficient algorithms in the design of systems for current and future graphics and visual computing applications.
HPC is co-located with EGSR, in Lyon, France, June 23-25, 2014. More information: http://www.highperformancegraphics.org/2014
High performance of modern Graphics Processing Units may be utilized not only for graphics related application but also for general computing. This computing power has been utilized in new variants of many algorithms from almost every computer science domain. Unfortunately, while other application domains strongly benefit from utilizing the GPUs, databases related applications seem not to get enough attention. The main goal of GPUs in Databases workshop is to fill this gap. This event is devoted to sharing the knowledge related to applying GPUs in Database environments and to discuss possible future development of this application domain.
ADBIS workshop on GPUs In Databases GID 2014, September 7th, 2014, Ohrid, Republic of Macedonia. More information: http://gid.us.to
Developed in partnership with NVIDIA, this hands-on four day course will teach how to write and optimize applications that fully leverage the multi-core processing capabilities of the GPU. Benefits include:
- Hands-on exercises and progressive lectures
- Individual laptops equipped with NVIDIA GPUs for student use
- Small class sizes to maximize learning
- 90 days post training support – NEW!
February 25-28, 2014, Baltimore, MD, USA, details and registration.
This webinar will demonstrate how real-world computational research in soft matter physics can be accelerated on a GPU-equipped desktop computer with the HOOMD-blue molecular dynamics software. A presentation of how to set up a simulation of a dense polymer liquid, and how to analyze and visualize the results is provided. There will be a demonstration of how self-assembled ordered structures of block copolymers emerge out of an initially disordered configuration. With external potentials, an artificially ordered phase can be produced as well. HOOMD-blue’s easy-to-use scripting interface and plug-ins are used to create a productive work-flow and extend its capabilities. As an advanced topic, there will be a discussion of how the upcoming version of HOOMD-blue can be used on compute clusters running on ten to hundreds of GPUs in parallel, to boost simulations of long polymer chains or large-scale systems.
January 21, 2014, 11:00 a.m. EST, Registration required.