Course on Antenna Synthesis with elements of GPU computing

August 14th, 2014

The course on Antenna Synthesis (with elements of GPU computing) is organized in the framework of the European School of Antennas. The course will take place at the Partenope Conference Center of the Università di Napoli Federico II, Napoli, Italy, on October 13-17, 2014. It faces three topics corresponding to the two main aspects of Antenna Synthesis, namely external and internal synthesis, and to numerical and implementation issues on High Performance Computing (HPC) platforms of synthesis algorithms. For details about the course please see this brochure and http://www.antennasvce.org/Community/Education/Courses?id_folder=533.

New book: Numerical Computations with GPUs

July 22nd, 2014

A new book titled “Numerical Computations with GPUs” has been published:

This book brings together research on numerical methods adapted for Graphics Processing Units (GPUs). It explains recent efforts to adapt classic numerical methods, including solution of linear equations and FFT, for massively parallel GPU architectures. This volume consolidates recent research and adaptations, covering widely used methods that are at the core of many scientific and engineering computations. Each chapter is written by authors working on a specific group of methods; these leading experts provide mathematical background, parallel algorithms and implementation details leading to reusable, adaptable and scalable code fragments. This book also serves as a GPU implementation manual for many numerical algorithms, sharing tips on GPUs that can increase application efficiency. The valuable insights into parallelization strategies for GPUs are supplemented by ready-to-use code fragments. Numerical Computations with GPUs targets professionals and researchers working in high performance computing and GPU programming. Advanced-level students focused on computer science and mathematics will also find this book useful as secondary text book or reference.

From the table of contents: Read the rest of this entry »

CUDA Course Sept 2-5, 2014, Houston

July 22nd, 2014

Partnering with NVIDIA, this four day CUDA training course, held in Houston is designed for programmers in the oil and gas industry who are looking to develop comprehensive skills in writing and optimizing applications that fully leverage the many-core processing capabilities of the GPU. Commonly used algorithms such as filtering and FFTs will be used and profiled in the examples. The case study on day 4 focuses on efficient implementation of a finite difference algorithm which is highly applicable to reverse time migration. However a background in oil and gas is not necessary. For more information and to view a copy of the course outline please visit: http://acceleware.com/training/987

Boost.Compute v0.3 Released

July 21st, 2014

Boost.Compute is a header-only C++ library for GPGPU and parallel-computing based on OpenCL. It provides a low-level C++ wrapper over OpenCL and high-level STL-like API with containers and algorithms for the GPU. It is available on GitHub and instructions for getting started can be found in the documentation. See the full announcement here: http://kylelutz.blogspot.com/2014/07/boost-compute-v0.3-released.html

rCUDA 4.2 version available

June 19th, 2014

A new version of the rCUDA middleware has been released (version 4.2). In addition to fix some minor bugs, the new release provides support for:

  • CUDA 6.0 Runtime API
  • New stream management
  • cuSPARSE libraries

The rCUDA middleware allows to seamlessly use, within your cluster, GPUs that are installed in computing nodes different from the one that is executing the CUDA application, without requiring to modify your program. Please visit www.rcuda.net for more details about the rCUDA technology.

BROCCOLI: Software for fast fMRI analysis on many-core CPUs and GPUs

May 27th, 2014

Abstract:

Analysis of functional magnetic resonance imaging (fMRI) data is becoming ever more computationally demanding as temporal and spatial resolutions improve, and large, publicly available data sets proliferate. Moreover, methodological improvements in the neuroimaging pipeline, such as non-linear spatial normalization, non-parametric permutation tests and Bayesian Markov Chain Monte Carlo approaches, can dramatically increase the computational burden. Despite these challenges, there do not yet exist any fMRI software packages which leverage inexpensive and powerful GPUs to perform these analyses. Here, we therefore present BROCCOLI, a free software package written in OpenCL that can be used for parallel analysis of fMRI data on a large variety of hardware configurations. BROCCOLI has, for example, been tested with an Intel CPU, an Nvidia GPU, and an AMD GPU. These tests show that parallel processing of fMRI data can lead to significantly faster analysis pipelines. This speedup can be achieved on relatively standard hardware, but further speed improvements require only a modest investment in GPU hardware. BROCCOLI (running on a GPU) can perform non-linear spatial normalization to a 1 mm3 brain template in 4–6 s, and run a second level permutation test with 10,000 permutations in about a minute. These non-parametric tests are generally more robust than their parametric counterparts, and can also enable more sophisticated analyses by estimating complicated null distributions. Additionally, BROCCOLI includes support for Bayesian first-level fMRI analysis using a Gibbs sampler. The new software is freely available under GNU GPL3 and can be downloaded from github: https://github.com/wanderine/BROCCOLI.

(A. Eklund, P. Dufort, M. Villani and S. LaConte: “BROCCOLI: Software for fast fMRI analysis on many-core CPUs and GPUs”. Front. Neuroinform. 8:24, 2014. [DOI])

PARALUTION 0.7.0 released

May 27th, 2014

PARALUTION is a library for sparse iterative methods which can be performed on various parallel devices, including multi-core CPU, GPU (CUDA and OpenCL) and Intel Xeon Phi. The new 0.7.0 version provides the following new features:

  • Windows support – full windows support for all backends (CUDA, OpenCL, OpenMP)
  • Assembling function – new OpenMP parallel assembling function for sparse matrices (includes an update function for time-dependent problems)
  • Direct (dense) solvers (for very small problems)
  • (Restricted) Additive Schwarz preconditioners
  • MATLAB/Octave plug-in

To avoid OpenMP overhead for small sized problems, the library will compute in serial if the size of the matrix/vector is below a pre-defined threshold. Internally, the OpenCL backend has been modified for simplified cross platform compilation.

Webinar, May 20th: Accelerating GIS Big Data Processing

May 18th, 2014

Join the free webinar on May 20th devoted to accelerating orthorectification, atmospheric correction, and transformations for big data with GPUs. Learn how GPU capabilities can improve time for processing large imagery 50-100 times faster. Amanda O’Connor, a Senior Solutions Engineer at Exelis will walk you through implementation of GPU processing for large imagery datasets, operational use of GPU processing for orthorectification and share benchmarks against desktop algorithms. To register follow this link: https://www2.gotomeeting.com/register/665929994.

Boost.Compute v0.2 Released

May 15th, 2014

Boost.Compute v0.2 has been released! Boost.Compute is a header-only C++ library for GPGPU and parallel-computing based on OpenCL. It is available on GitHub and instructions for getting started can be found in the documentation. Since version 0.1 (released almost two months ago) new algorithms including unique(), search() and find_end() have been added, along with several bug fixes. See the project page on GitHub for more information: https://github.com/kylelutz/compute

GPUPROF 0.3 Released

May 15th, 2014

A new version of the GPU-profiler for CUDA software stack is available at www.lab4241.com. The GPU-profiler is able to deliver per C++ source-code ‘inside’ kernel performance information in a simple, intuitive way, similar to known CPU domain profilers, like Quantify or Valgrind. The new version, GPUPROF version 0.3 (beta), includes improved stability, refined memory tracing, temporal memory analysis, and CUDA API-driver call tracing.

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